Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs34937307 chr16:975857 A/G 0.000106 285 26.83 25.57 14.83 KM Plot
KIRP rs34945885 chr4:160510886 CG/C 7.43E-12 288 25.58 34.3 8.6 KM Plot
KIRP rs34950484 chr6:28278688 G/A 0 289 25.6 26.58 9.38 KM Plot
KIRP rs34961555 chr6:26199903 C/T 1.08E-8 286 25.5 35.42 9.77 KM Plot
KIRP rs34965299 chr6:27521856 A/G 1.18E-8 289 25.62 27.27 9.77 KM Plot
KIRP rs35001169 chr6:28187632 T/G 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs35016036 chr6:28314880 C/T 1.73E-8 287 25.58 26.38 9.77 KM Plot
KIRP rs35017208 chr6:28345282 C/T 2.0E-8 284 25.58 26.37 9.77 KM Plot
KIRP rs35030260 chr6:28305508 G/A 1.38E-8 289 25.6 26.4 9.77 KM Plot
KIRP rs35037868 chr6:27759115 G/C 1.46E-8 288 25.62 29.2 9.77 KM Plot
KIRP rs35044849 chr6:28667669 A/G 2.46E-8 282 25.57 28.02 9.77 KM Plot
KIRP rs35072899 chr6:28281541 C/T 1.54E-8 288 25.6 27.78 9.77 KM Plot
KIRP rs35098436 chr6:28134221 T/C 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs35131670 chr16:90058157 T/G 0.000164 287 24.73 35.32 10.23 KM Plot
KIRP rs35146061 chr18:38843261 C/G 2.14E-5 287 25.53 34.77 18.38 KM Plot